Recent Publications

Selected Recent Publications

Babady NE, L Bourassa, C-AD Burnham, M Fisher, E McElvania, CR Polage, JA Ribes. 2021. Multicenter evaluation of processing and analysis of College of American Pathologists (CAP) proficiency testing samples by laboratory automation. J Clin Microbiol 59:e03233-20. https://doi.org/10.1128/JCM.03233-20

Bhatt, M; JZ Porterfireld; JA Ribes, V Arora; T Myint.  Changing Demographics and Risk Factors for Cryptococcosis: A 12 Year Review at a Tertiary Care Center.  Accepted for Publication May 18, 2021 in Mycoses DOI: 10.1111/myc.13323.

Cavanaugh AM, Fortier S, Lewis P, Arora V, et al. COVID-19 Outbreak Associated with a SARS-CoV-2 R.1 Lineage Variant in a Skilled Nursing Facility After Vaccination Program-Kentucky, March 2021. MMWR Morb Mortal Wkly Rep 2021; 70:639-643. DOI: http://dx.doi.org/10.15585/mmwr.mm7017e2

Rowe AD, Stoway SD, Ahlman H, Arora V, Caggana M, Fornari A, Hagar A, Hall PL, Marquardt GC, Miller BJ, Nixon C, Norgan AP, Orsini JJ, Pettersen RD, Piaza AL, Schubauer NR, Smith AC, Tang H, Tavakoli NP, Wei S, Zetterstrom RH, Currier RJ, Morkrid L, Rinaldo P.  A Novel Approach to Improve Newborn Screening for Congenital Hypothyroidism by Integrating Tools.  International Journal of Neonatal Screening. 2021; 7(2):23. https://doi.org/10.3390/ijns7020023

Gwag T, Mooli RG, Li D, Lee S, Lee EY, Wang S. Macrophage-derived thromboplastin 1 promotes obesity-associated non-alcoholic fatty liver disease.  JHEP Rep.2021 Feb:3(1): 100193

Johnson J, Chow Z, Lee EY, Weiss HL, Evers BM, Rychahou P. Role of Akt and AMPk in triple negative breast cancer lung metastasis. Neoplasia. 23(4): 429-438, 2021

Kim JT, Napier DL, Kim J, Li C, Lee EY, Weiss HL, Wang Q, Evers BM. Ketogenesis alleviates TNF a-induced apoptosis and inflammatory responses in intestinal cells. Free Radical Biology. 172:90-100, 2021

Schinstock CA, Askar M, Bagnasco SM, Batal I, Bow L, Budde K, Campbell P, Carroll R, Clahsen-van Groningen MC, Cooper M, Cornell LD, Cozzi E, Dadhania D, Diekmann F, Hesselink DA, Jackson AM, Kikic Z, Lower F, Naesens M, Roelofs JJ, Sapir-Pichhadze R, Kraus ES: A 2020 Banff antibody-mediated injury working group examination of international practices for diagnosing antibody-mediated rejection in kidney transplantation- a cohort study. Transplant International 34:488, 2021

Farnsworth C, Schuler EE, Woodworth A et al.  AACC Guidance Document on Laboratory Testing for the Assessment of Preterm Delivery.  The Journal of Applied Laboratory Medicine. 2021; 6(4): 1032-1044.

Allison, DB. Spotlight: Rising Stars in Cytology.  Cancer Cytopathology (Online Pre-print May 12, 2021). https://doi.org/10.1002/cncy.22444

Allison, DB. Challenges in Recognizing Urothelial Carcinoma in situ with Plasmacytoid Features by Urinary Cytology. Cancer Cytopathology. 2021 Oct;129(10):772-773. doi:10.1002/cncy.22446. (Online Pre-print April 26, 2021).

Moore RF, Zhang XR, Allison DB, Rooper LM, Campbell AA, Eberhard CG. High-Risk Human Papillomavirus and ZEB1 in Ocular Adnexal Sebaceous Carcinoma. Journal of Cutaneous Pathology. 2021; 1-7.

Corey B Hughes, George M Mussman, Phil Ray, Robert C Bunn, Virgilius Cornea, Kathryn M Thraikill, John L Fowlkes, luliana Popescu, Impact of an SGLT2-loss of function mutation on renal architecture, histology, and glucose homeostasis, Cell and Tissue Research, 384, pages 527-543 (2021)

Cytopathological characteristics of solitary fibrous tumour involving the pancreas by fine needle aspiration: Making an accurate preoperative diagnosis in an uncommon location.  Jones VM, Wangsiricharoen S, Cornea V, Bocklage TJ, Ali SZ, Allison DB, Jones VM, et al. Among authors: Bocklage TJ. Cytopathology. 2021 Sep 22. doi: 10.1111/cyt.13061. Online ahead of print. Cytopathology. 2021. PMID: 34551176.

Innate immune activation by checkpoint inhibition in human patient-derived lung cancer tissues. Fan TW, Higashi RM, Song H, Daneshmandi S, Mahan AL, Purdom MS, Bocklage TJ, Pittman TA, He D, Wang C, Lane AN, Fan TW, et al. Among authors: Bocklage TJ. Elife. 2021 Aug 18; 10:e69578. doi: 10.7554/eLife.69578.Elife. 2021. PMID: 34406120.

Myint ZW, Sun RC, Hensley PJ, James AC, Wang P, Strup SE, McDonald RJ, Yan D, St. Clair WH, Allison DB. Evaluation of Glutaminase Expression in Prostate Adenocarcinoma and Correlation with Clinicopathologic Parameters. Cancers. 2021; 13(9):2157

O'Connor W, Ferreira J (2021). Autopsy Proven T lymphocyte Mediated Myocarditis as a Complication of SARS-CoV-2 Infection. CAP21 September 25-28, 2021. Archives of Pathology & Laboratory Medicine; www.archivesofpathology.org.*

Su J, Song Q, Qasem S, O'Neill, S, Lee J, Furdui CM, Pasche B, Metheny-Barlow L, Masters AH, Lo HW, Xing F, Watabe K, Miller LD, Tatter SB, Laxton AW, Whitlow CT, Chan MD, Soike MH, Ruiz J. Multi-Omics Analysis of Brain Metastasis Outcomes Following Craniotomy. Front Oncol. 2021 Apr 6;10:615472. doi: 10.3389/fonc.2020.615472. PMID: 33889540

Neltner J, Bocklage T. Levering adult learning principles into a residency core curriculum.  Cancer Cytopathol. 2021 Jul;129(7):501-505. doi:10.1002/cncy.22418. Epub 2021 Mar 19. PMID: 33739608.

Gan T, Schaberg KB, He D, Mansour A, Kapoor H, Wang C, Evers BM, Bocklage TJ.  Association Between Obesity and Histological Tumor Budding in Patients With Nonmetastatic Colon Cancer. JAMA Netw Open. 2021 Apr 1;4(4):e213897.doi:10.1001/jamanetworkopen. 2021.3897.  PMID: 33792733; PMCID:  PMC8017472.

Brainson CF, Huang B, Chen Q, McLouth LE, He C, HAE Z, Arnold SM, Zinner RG, Mullett TW, Bocklage TJ, Orren DK, Villano JL, Drubin EB. Description of a Lung Cancer Hotspot: Disparities in Lung Cancer Histology, Incidence, and Survival in Kentucky and Appalachian Kentucky. Clin Lung Cancer. 2021 Mar 26:S1525-7304(21)00061-9. doi: 10.1016/j.cllc.2021.03.007. Epub ahead of print. PMID: 33958300.

Stanback AE, Conroy LR, Young LEA, Markussen KH, Hawkinson TR, Clark HA, Allison DB, Sun RC. Regional N-Glycan and Lipid Analysis from Tissues Using MALDI-Mass Spectrometry Imaging. STAR Protocols. 2021;2(1):100304.

Smith AP, Dueber JC, Allison DB. A Diagnostic Review of Carcinomas and Sarcomas of the Mediastinum: Making the diagnosis on fine-needle aspiration and core needle biopsy specimens. Semin Diagn Pathol. 2020;37(4):187-198.

Allison DB, Smith AP, An D, et al. Assessing the diagnostic accuracy for pleomorphic adenoma and warthin tumor by employing the Milan System for Reporting Salivary Gland Cytopathology: An international, multi-institutional study. [published online ahead of print, Aug 7, 2020]. Cancer Cytopathol. 2021;129(1):43-52.29)

Zahra M, Allison DB, Hill M, Satomi K, David E, Pantanowitz L. Application of The Milan System for Reporting Salivary Gland Cytopathology to Cystic Salivary Gland Lesions. Cancer Cytopathol.2021;129:214-25.30)

Bachert SE, Baldwin LA, Dueber JC, West-Piecoro D. Ovarian Primitive Neuroectodermal Tumor: Are you central or peripheral? Int J Gynecol Pathol. 2021 Apr 12;. doi: 10.1097/PGP.0000000000000789. [Epub ahead of print] PubMed PMID: 33852507.

Karanth SD, Schmitt FA, Nelson PT, Katsumata Y, Kryscio RJ, Fardo DW, Harp JP, Abner EL. Four Common Late-Life Cognitive Trajectories Patterns Associated with Replicable Underlying Neuropathologies.  J Alzheimers Dis. 2021 May 28. doi: 10.3233/JAD-210293. PMID: 34057090

Heindl S, Ricci A, Carofiglio O, Zhou Q, Arzberger T, Lenart N, Franzmeier N, Hortobagyi T, Nelson PT, Stowe AM, Denes A, Edbauer D, Liesz A. Chronic T cell proliferation in brains after stroke could interfere with the efficacy of immunotherapies.  J Exp Med. 2021 Aug 2;218(8);e20202411.doi: 10.1084/jem.20202411. PMID: 34037669

Bachstetter AD, Garrett FG, Jicha GA, Nelson PT. Space-occupying brain lesions, trauma-related tau astrogliopathy, and ARTAG: a report of two cases and a literature review. Acta Neuropathol Commun. 2021 Mar 23;9(1):49. doi: 10.1186/s40478-021-01152-3. PMID: 33757579

Kelly SC, Nelson PT, Counts SE. Pontine Arteriolosclerosis and Locus Coeruleus Oxidative Stress Differentiate Resilience from Mild Cognitive Impairment in a Clinical Pathologic Cohort. J Neuropathol Exp Neurol. 2021 Mar 22;80(4):325-335. doi:10.1093/jnen/nlab017. PMID: 33709107

Ly H, Verma N, Sharma S, Kotiya D, Despa S, Abner EL, Nelson PT, Jicha GA, Wilcock DM, Goldstein LB, Guerreiro R, Bras J, Hanson AJ, Craft S, Murray AJ, Biessels GJ, Troakes C, Zetterberg H, Hardy J, Lashley T, Aesg, Despa F. The association of circulating amylin with B-amyloid in familial Alzheimer's disease.  Alzheimers Dement (NY). 2021 Jan 20;7(1):e12130. doi: 10.1002/trc2.12130 PMID: 33521236

Shahidehpour RK, Higdon RE, Crawford NG, Neltner JH, Ighodaro ET, Patel E, Price D, Nelson PT, Bachstetter AD. Dystrophic microglia are associated with neurodegenerative disease and not healthy aging in the human brain. Neurobiol Aging. 2021 Jan 6;99:19-27. doi: 0.1016/j.neurobiolaging.2020.12.003. PMID: 33422891

Attems J, Toledo JB, Walker L, Gelpi E, Gentleman S, Halliday G, Hortobagyi T, Jellinger K, Kovacs GG, Lee EB, Love S, McAleese KE, Nelson PT, Neumann M, Parkkinen L, Polvikoski T, Sikorska B, Smith C, Grinberg LT, Thal DR, Trojanowski JQ, McKeith IG.Acta Neuropathol. Neuropathological consensus criteria for the evaluation of Lewy pathology in post-mortem brains: a multi-centre study. 2021 Jan 5. doi: 10.1007/s00401-020-02255-2. PMID: 33399945

Bao WD, Pang P, Zhou XT, Hu F, Xiong W, Chen K, Wang J, Wang F, Xie D, Hu YZ, Han ZT, Zhang HH, Wang WX, Nelson PT, Chen JG, Lu Y, Man HY, Liu D, Zhu LQ. Loss of ferroportin induces memory impairment by promoting ferroptosis in Alzheimer's disease. Cell Death Differ. 2021 Jan 4. doi: 10.1038/s41418-020-00685-9. PMID: 33398092 

Al-Obaidy KI, Williamson SR, Shelman N, Idrees MT, Ulbright TM. Hepatoid Teratoma, Hepatoid Yolk Sac Tumor, and Hepatocellular Carcinoma: A Morphologic and Immunohistochemical Study of 30 Cases. Am J Surg Pathol. 2021 Jan;45(1):127-136.

Gatineau E, Arthur G, Poupeau A, Nichols K, Spear BT, Shelman NR, Graf GA, Temel RE, Yiannikouris FB. The prorenin receptor and its soluble form contribute to lipid homeostasis. Am J Physiol Endocrinol Metab. 2021 Mar 1;320(3):E609-E618.

O'Brien KJ, Parisi X, Shelman NR, Merideth MA, Introne WJ, Heller T, Gahl WA, Malicdan MCV, Gochuico BR. Inflammatory bowel disease in Hermansky-Pudlak syndrome: a retrospective single-centre cohort study. J Intern Med. 2021 Jul; 290(1):129-140.

Wang-Xia Wang, Prajapati P, Vekaria HJ, Spry M, Cloud AL, Sullivan PG, and Springer JE. (2021) Temporal changes in inflammatory mitochondria-enriched microRNAs following traumatic brain injury and effects of miR-146a nanoparticle delivery. Neural Regen Res. 2021 Mar;16(3):514-522. doi:10.4103/1673-5374.293149. PMID: 32985480 (Co-corresponding author). Cited by: 1 (source: Google Scholar)

Wang-Xia Wang, Springer JE, Xie K, Fardo DW, and Hatton KW (2021) A Highly Predictive MicroRNA Panel for Determining Delayed Cerebral Vasospasm Risk Following Aneurysmal Subarachnoid Hemorrhage. Front. Mol. Biosci. 8:657258. doi: 10.3389/fmolb.2021.657258 (Co-corresponding author) 

Niedowicz DM, Wang-Xia Wang, Price DA, Nelson PT (2021) Modulating Thyroid Hormone Levels in Adult Mice: Impact on Behavior and Compensatory Brain Changes. J. Thyroid Res. doi.org/10.1155/2021/9960188

Rowe AD, Stoway SD, Ahlman H, Arora V, Caggana, Fornari A, Hall PL, Marquardt GC, Miller BJ, Nixon C, Norgan AP, Orsini JJ, Pettersen RD, Piazza AL, Schubauer NR, Smith AC, Tang H, Tavakoli N, Wei S, Zetterstrom RH, Currier RJ, Morkrid L, and Rinaldo P. Enhanced performance of newborn screening for congenital hypothyroidism by integrating covariate-adjusted results of different tests into CLIR customized interpretive tools Int J Neonatal Screen 2021;7(2):23.

Asamoah A, Wei S, Jackson K, Hersh J and Levy H. Diagnosis of Classic Homocystinuria in 2 boys presenting with acute cerebral venous thrombosis and neurologic dysfunction after normal newborn screening Int J Neonatal Screen 2021 submitted. doi: 10.3390/ijns7030048. PMID: 34449521.

Fenwick AJ, Bergman Y, Lewis S, et al. Evaluation of the NG-Test MCR-1 Lateral Flow Assay and EDTA-Colistin Broth Disk Elution Methods To Detect Plasmid-Mediated Colistin Resistance among Gram-Negative Bacterial Isolates. J Clin Microbiol. 2020;58(4):e01823-19. Published 2020 Mar 25. doi:10.1128/JCM.01823-19.

Fenwick AJ, Gehrie EA, Marshall CE, Tobian AAR, Shrestha R, Kacker S, Brunker PAR, Shifflett L, Carroll KC, Gozelanczyk D, Goel R, Ness PM, Bloch EM. Secondary bacterial culture of platelets to mitigate transfusion-associated sepsis: A 3-year analysis at a large academic institution [published online ahead of print, 2020 Aug 4]. Transfusion. 2020;10.1111/trf.15978. doi:10.1111/trf.15978.

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